Seita.9G312700.1

Description : AT hook motif DNA-binding family protein

Gene families : OG_01_0010097 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010097_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G312700.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_24

Type	GO Term	Name	Evidence	Source
MF	GO:0000217	DNA secondary structure binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003680	minor groove of adenine-thymine-rich DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005175	PPC_dom	CDD	199	313
IPR039605	AHL	PANTHER	55	366
IPR005175	PPC_dom	ProSiteProfiles	195	334
IPR005175	PPC_dom	Pfam	200	313
IPR005175	PPC_dom	CDD	199	313
IPR039605	AHL	PANTHER	57	420
IPR005175	PPC_dom	ProSiteProfiles	195	334
IPR005175	PPC_dom	Pfam	200	313

No CAZYmes available for this sequence

External Links

No external refs found!