Sevir.1G233400.1

Description : SET domain group 4

Gene families : OG_01_0003563 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003563_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G233400.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G233400.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_78
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_72

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
MF	GO:0018024	obsolete histone lysine N-methyltransferase activity	ISM	GOs from InterProScan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001214	SET_dom	ProSiteProfiles	264	381
IPR013083	Znf_RING/FYVE/PHD	Gene3D	54	150
IPR001965	Znf_PHD	SMART	57	105
IPR001965	Znf_PHD	SMART	106	150
IPR006560	AWS_dom	ProSiteProfiles	219	264
IPR019786	Zinc_finger_PHD-type_CS	ProSitePatterns	58	121
IPR025787	Hist-Lys_N-MeTrfase_SET2_plant	ProSiteProfiles	14	430
IPR001214	SET_dom	SMART	264	387
IPR001214	SET_dom	Pfam	275	380

No CAZYmes available for this sequence

External Links

No external refs found!