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  5. Seita.9G326300.1

Seita.9G326300.1


Description : expansin B2


Gene families : OG_01_0000116 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000116_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G326300.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_40


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007118 Expan_Lol_pI PRINTS 208 222
IPR007118 Expan_Lol_pI PRINTS 150 166
IPR007118 Expan_Lol_pI PRINTS 40 55
IPR007118 Expan_Lol_pI PRINTS 247 261
IPR007118 Expan_Lol_pI PRINTS 60 78
IPR007118 Expan_Lol_pI PRINTS 82 100
IPR009009 RlpA-like_DPBB Pfam 78 157
IPR036749 Expansin_CBD_sf SUPERFAMILY 168 261
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 61 167
IPR007112 Expansin/allergen_DPBB_dom SMART 78 157
IPR036749 Expansin_CBD_sf Gene3D 163 262
IPR036908 RlpA-like_sf Gene3D 26 162
IPR007117 Expansin_CBD ProSiteProfiles 180 261
IPR005795 LolPI PRINTS 80 91
IPR005795 LolPI PRINTS 171 186
IPR005795 LolPI PRINTS 117 132
IPR005795 LolPI PRINTS 139 154
IPR005795 LolPI PRINTS 187 202
IPR005795 LolPI PRINTS 217 234
IPR005795 LolPI PRINTS 100 110
IPR005795 LolPI PRINTS 237 254
IPR007117 Expansin_CBD Pfam 169 250
IPR036908 RlpA-like_sf SUPERFAMILY 36 166
IPR009009 RlpA-like_DPBB Pfam 78 157
IPR007118 Expan_Lol_pI PRINTS 208 222
IPR007118 Expan_Lol_pI PRINTS 150 166
IPR007118 Expan_Lol_pI PRINTS 40 55
IPR007118 Expan_Lol_pI PRINTS 247 261
IPR007118 Expan_Lol_pI PRINTS 60 78
IPR007118 Expan_Lol_pI PRINTS 82 100
IPR007112 Expansin/allergen_DPBB_dom SMART 78 157
IPR007117 Expansin_CBD Pfam 169 250
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 61 167
IPR036749 Expansin_CBD_sf SUPERFAMILY 168 261
IPR007117 Expansin_CBD ProSiteProfiles 180 261
IPR036908 RlpA-like_sf Gene3D 26 162
IPR005795 LolPI PRINTS 80 91
IPR005795 LolPI PRINTS 171 186
IPR005795 LolPI PRINTS 117 132
IPR005795 LolPI PRINTS 139 154
IPR005795 LolPI PRINTS 187 202
IPR005795 LolPI PRINTS 217 234
IPR005795 LolPI PRINTS 100 110
IPR005795 LolPI PRINTS 237 254
IPR036749 Expansin_CBD_sf Gene3D 163 262
IPR036908 RlpA-like_sf SUPERFAMILY 36 166
HMM Family HMM Length Query Length e-Value Query Start Query End
CBM63 78 266 0.00059 171 245
No external refs found!