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  5. Seita.9G360800.1

Seita.9G360800.1


Description : casein lytic proteinase B3


Gene families : OG_01_0003347 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003347_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G360800.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
BP GO:0009408 response to heat ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
BP GO:0042026 protein refolding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004176 Clp_R_dom Pfam 102 151
IPR004176 Clp_R_dom Pfam 177 228
IPR018368 ClpA/B_CS1 ProSitePatterns 377 389
IPR027417 P-loop_NTPase SUPERFAMILY 633 938
IPR027417 P-loop_NTPase Gene3D 426 631
IPR027417 P-loop_NTPase Gene3D 232 425
IPR036628 Clp_N_dom_sf SUPERFAMILY 88 239
IPR003593 AAA+_ATPase SMART 684 855
IPR003593 AAA+_ATPase SMART 281 425
IPR028299 ClpA/B_CS2 ProSitePatterns 718 736
IPR003959 ATPase_AAA_core Pfam 286 417
IPR027417 P-loop_NTPase SUPERFAMILY 242 632
IPR036628 Clp_N_dom_sf Gene3D 85 231
IPR001270 ClpA/B PRINTS 688 706
IPR001270 ClpA/B PRINTS 762 780
IPR001270 ClpA/B PRINTS 795 809
IPR001270 ClpA/B PRINTS 733 751
IPR019489 Clp_ATPase_C SMART 858 952
IPR027417 P-loop_NTPase Gene3D 636 856
IPR017730 Chaperonin_ClpB NCBIfam 89 941
IPR041546 ClpA/ClpB_AAA_lid Pfam 425 526
IPR003959 ATPase_AAA_core Pfam 683 851
IPR004176 Clp_R_dom ProSiteProfiles 85 229
IPR019489 Clp_ATPase_C Pfam 858 938
IPR027417 P-loop_NTPase Gene3D 232 425
IPR027417 P-loop_NTPase Gene3D 426 631
IPR019489 Clp_ATPase_C Pfam 858 938
IPR017730 Chaperonin_ClpB TIGRFAM 89 941
IPR027417 P-loop_NTPase SUPERFAMILY 633 938
IPR001270 ClpA/B PRINTS 688 706
IPR001270 ClpA/B PRINTS 762 780
IPR001270 ClpA/B PRINTS 795 809
IPR001270 ClpA/B PRINTS 733 751
IPR041546 ClpA/ClpB_AAA_lid Pfam 425 526
IPR018368 ClpA/B_CS1 ProSitePatterns 377 389
IPR004176 Clp_R_dom Pfam 102 151
IPR004176 Clp_R_dom Pfam 177 228
IPR003593 AAA+_ATPase SMART 684 855
IPR003593 AAA+_ATPase SMART 281 425
IPR027417 P-loop_NTPase Gene3D 636 856
IPR027417 P-loop_NTPase SUPERFAMILY 242 632
IPR003959 ATPase_AAA_core Pfam 683 851
IPR004176 Clp_R_dom ProSiteProfiles 85 229
IPR036628 Clp_N_dom_sf SUPERFAMILY 88 239
IPR019489 Clp_ATPase_C SMART 858 952
IPR028299 ClpA/B_CS2 ProSitePatterns 718 736
IPR003959 ATPase_AAA_core Pfam 286 418
IPR036628 Clp_N_dom_sf Gene3D 85 231

No CAZYmes available for this sequence

No external refs found!