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  5. Seita.9G385500.1

Seita.9G385500.1


Description : RNA-binding KH domain-containing protein


Gene families : OG_01_0006404 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006404_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G385500.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_240


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036612 KH_dom_type_1_sf SUPERFAMILY 356 439
IPR036612 KH_dom_type_1_sf SUPERFAMILY 31 91
IPR036612 KH_dom_type_1_sf SUPERFAMILY 129 212
IPR004087 KH_dom SMART 36 109
IPR004087 KH_dom SMART 363 438
IPR004087 KH_dom SMART 134 209
IPR004087 KH_dom SMART 276 350
IPR036612 KH_dom_type_1_sf SUPERFAMILY 267 330
IPR004088 KH_dom_type_1 Pfam 40 93
IPR004088 KH_dom_type_1 Pfam 137 204
IPR004088 KH_dom_type_1 Pfam 366 433
IPR004088 KH_dom_type_1 Pfam 280 330
IPR036612 KH_dom_type_1_sf SUPERFAMILY 267 330
IPR036612 KH_dom_type_1_sf SUPERFAMILY 356 439
IPR004087 KH_dom SMART 36 109
IPR004087 KH_dom SMART 363 438
IPR004087 KH_dom SMART 134 209
IPR004087 KH_dom SMART 276 350
IPR036612 KH_dom_type_1_sf SUPERFAMILY 31 91
IPR036612 KH_dom_type_1_sf SUPERFAMILY 129 212
IPR004088 KH_dom_type_1 Pfam 280 330
IPR004088 KH_dom_type_1 Pfam 40 102
IPR004088 KH_dom_type_1 Pfam 366 430
IPR004088 KH_dom_type_1 Pfam 137 205

No CAZYmes available for this sequence

No external refs found!