Seita.9G402900.1

Description : GTP-binding family protein

Gene families : OG_01_0012856 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012856_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G402900.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_110

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR024929	GNL2_CP_dom	CDD	213	369
IPR023179	GTP-bd_ortho_bundle_sf	Gene3D	372	464
IPR006073	GTP-bd	PRINTS	317	337
IPR006073	GTP-bd	PRINTS	363	378
IPR006073	GTP-bd	Pfam	317	399
IPR027417	P-loop_NTPase	SUPERFAMILY	207	439
IPR030378	G_CP_dom	ProSiteProfiles	211	372
IPR027417	P-loop_NTPase	Gene3D	201	371
IPR012971	NOG2_N_dom	Pfam	49	174
IPR027417	P-loop_NTPase	SUPERFAMILY	207	439
IPR030378	G_CP_dom	ProSiteProfiles	211	372
IPR012971	NOG2_N_dom	Pfam	49	174
IPR006073	GTP-bd	Pfam	317	395
IPR027417	P-loop_NTPase	Gene3D	201	371
IPR006073	GTP-bd	PRINTS	317	337
IPR006073	GTP-bd	PRINTS	363	378
IPR024929	GNL2_CP_dom	PANTHER	7	535
IPR023179	GTP-bd_ortho_bundle_sf	Gene3D	372	464

No CAZYmes available for this sequence

External Links

No external refs found!