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  5. Seita.9G404200.1

Seita.9G404200.1


Description : tubby like protein 3


Gene families : OG_01_0005131 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005131_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G404200.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_240


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR018066 Tubby_C_CS ProSitePatterns 385 400
IPR000007 Tubby_C Pfam 111 395
IPR025659 Tubby-like_C SUPERFAMILY 99 400
IPR000007 Tubby_C PRINTS 165 181
IPR000007 Tubby_C PRINTS 330 346
IPR000007 Tubby_C PRINTS 312 329
IPR000007 Tubby_C PRINTS 378 400
IPR000007 Tubby_C PRINTS 181 205
IPR000007 Tubby_C PRINTS 357 376
IPR000007 Tubby_C PRINTS 230 257
IPR036047 F-box-like_dom_sf SUPERFAMILY 39 92
IPR018066 Tubby_C_CS ProSitePatterns 330 343
IPR025659 Tubby-like_C Gene3D 108 400
IPR000007 Tubby_C Pfam 111 395
IPR036047 F-box-like_dom_sf SUPERFAMILY 39 92
IPR018066 Tubby_C_CS ProSitePatterns 330 343
IPR001810 F-box_dom Pfam 50 91
IPR018066 Tubby_C_CS ProSitePatterns 385 400
IPR025659 Tubby-like_C Gene3D 108 400
IPR000007 Tubby_C PRINTS 165 181
IPR000007 Tubby_C PRINTS 330 346
IPR000007 Tubby_C PRINTS 312 329
IPR000007 Tubby_C PRINTS 378 400
IPR000007 Tubby_C PRINTS 181 205
IPR000007 Tubby_C PRINTS 357 376
IPR000007 Tubby_C PRINTS 230 257
IPR025659 Tubby-like_C SUPERFAMILY 99 400

No CAZYmes available for this sequence

No external refs found!