Seita.9G410500.1

Description : RELA/SPOT homolog 1

Gene families : OG_01_0007476 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007476_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G410500.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_262

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015969	guanosine tetraphosphate metabolic process	ISM	GOs from InterProScan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003607	HD/PDEase_dom	SMART	174	294
IPR004095	TGS	Pfam	572	631
IPR043519	NT_sf	SUPERFAMILY	333	512
IPR033655	TGS_RelA/SpoT	CDD	573	631
IPR006674	HD_domain	ProSiteProfiles	178	285
IPR012676	TGS-like	SUPERFAMILY	559	631
IPR007685	RelA_SpoT	Pfam	384	501
IPR012675	Beta-grasp_dom_sf	Gene3D	565	641
IPR007685	RelA_SpoT	SMART	382	507
IPR003607	HD/PDEase_dom	CDD	176	307
IPR043519	NT_sf	Gene3D	334	487
IPR004095	TGS	ProSiteProfiles	568	631
IPR007685	RelA_SpoT	CDD	374	495
IPR003607	HD/PDEase_dom	SMART	174	294
IPR043519	NT_sf	Gene3D	334	487
IPR043519	NT_sf	SUPERFAMILY	333	512
IPR007685	RelA_SpoT	Pfam	384	501
IPR007685	RelA_SpoT	CDD	374	495
IPR007685	RelA_SpoT	SMART	382	507
IPR033655	TGS_RelA/SpoT	CDD	573	631
IPR004095	TGS	ProSiteProfiles	568	631
IPR012676	TGS-like	SUPERFAMILY	559	631
IPR004095	TGS	Pfam	572	631
IPR012675	Beta-grasp_dom_sf	Gene3D	565	641
IPR003607	HD/PDEase_dom	CDD	176	307
IPR006674	HD_domain	ProSiteProfiles	178	285

No CAZYmes available for this sequence

External Links

No external refs found!

Seita.9G410500.1

Expression Profile

Co-expression Networks

Functional Annotation