Sevir.7G060300.1

Description : DNA binding;DNA binding;sequence-specific DNA binding transcription factors

Gene families : OG_01_0001985 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001985_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.7G060300.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_73

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR039218	REM_fam	PANTHER	306	354
IPR003340	B3_DNA-bd	ProSiteProfiles	69	165
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	312	353
IPR003340	B3_DNA-bd	CDD	70	162
IPR003340	B3_DNA-bd	CDD	312	339
IPR003340	B3_DNA-bd	Pfam	72	161
IPR003340	B3_DNA-bd	SMART	72	165
IPR003340	B3_DNA-bd	ProSiteProfiles	288	355
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	63	166
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	293	356
IPR039218	REM_fam	PANTHER	53	254
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	68	166

No CAZYmes available for this sequence

External Links

No external refs found!