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  5. Seita.9G513200.1

Seita.9G513200.1


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0006256 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006256_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G513200.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045151 DCAF8 PANTHER 13 738
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 402 483
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 36 351
IPR001680 WD40_rpt SMART 209 249
IPR001680 WD40_rpt SMART 652 691
IPR001680 WD40_rpt SMART 44 83
IPR001680 WD40_rpt SMART 141 181
IPR001680 WD40_rpt SMART 606 649
IPR001680 WD40_rpt SMART 274 312
IPR001680 WD40_rpt SMART 86 128
IPR001680 WD40_rpt Pfam 49 83
IPR001680 WD40_rpt Pfam 654 690
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 46 692
IPR001680 WD40_rpt ProSiteProfiles 659 700
IPR011990 TPR-like_helical_dom_sf Gene3D 380 509
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 610 730
IPR001680 WD40_rpt ProSiteProfiles 51 92
IPR001680 WD40_rpt SMART 209 249
IPR001680 WD40_rpt SMART 652 691
IPR001680 WD40_rpt SMART 44 83
IPR001680 WD40_rpt SMART 141 181
IPR001680 WD40_rpt SMART 606 649
IPR001680 WD40_rpt SMART 274 312
IPR001680 WD40_rpt SMART 86 128
IPR001680 WD40_rpt Pfam 49 83
IPR001680 WD40_rpt Pfam 659 690
IPR001680 WD40_rpt ProSiteProfiles 51 92
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 36 351
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 46 692
IPR001680 WD40_rpt ProSiteProfiles 659 700
IPR011990 TPR-like_helical_dom_sf Gene3D 380 509
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 610 730
IPR045151 DCAF8 PANTHER 28 747
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 402 483

No CAZYmes available for this sequence

No external refs found!