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  5. Seita.9G528300.1

Seita.9G528300.1


Description : vesicle-associated membrane protein 726


Gene families : OG_01_0000329 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000329_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G528300.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_170


Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR042855 V_SNARE_CC ProSiteProfiles 131 191
IPR042855 V_SNARE_CC Pfam 130 216
IPR010908 Longin_dom ProSiteProfiles 11 115
IPR011012 Longin-like_dom_sf SUPERFAMILY 7 122
IPR001388 Synaptobrevin-like ProSitePatterns 149 168
IPR010908 Longin_dom SMART 32 114
IPR001388 Synaptobrevin-like PRINTS 192 211
IPR001388 Synaptobrevin-like PRINTS 156 175
IPR001388 Synaptobrevin-like PRINTS 136 155
IPR010908 Longin_dom CDD 8 122
IPR010908 Longin_dom Pfam 33 111
IPR010908 Longin_dom Pfam 33 105
IPR001388 Synaptobrevin-like PRINTS 192 211
IPR001388 Synaptobrevin-like PRINTS 156 175
IPR001388 Synaptobrevin-like PRINTS 136 155
IPR010908 Longin_dom ProSiteProfiles 11 115
IPR010908 Longin_dom CDD 8 122
IPR010908 Longin_dom SMART 32 114
IPR042855 V_SNARE_CC ProSiteProfiles 131 191
IPR001388 Synaptobrevin-like ProSitePatterns 149 168
IPR042855 V_SNARE_CC Pfam 130 216
IPR011012 Longin-like_dom_sf SUPERFAMILY 7 122

No CAZYmes available for this sequence

No external refs found!