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  5. Seita.9G546900.1

Seita.9G546900.1


Description : no pollen germination related 2


Gene families : OG_01_0000653 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000653_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G546900.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_116


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 420 562
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 152 556
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 529 701
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 151 367
IPR011990 TPR-like_helical_dom_sf Gene3D 563 670
IPR019734 TPR_repeat SMART 582 615
IPR019734 TPR_repeat SMART 149 182
IPR019734 TPR_repeat SMART 527 560
IPR019734 TPR_repeat SMART 686 721
IPR019734 TPR_repeat SMART 334 367
IPR019734 TPR_repeat SMART 616 649
IPR043376 NPG1-like PANTHER 11 727
IPR011990 TPR-like_helical_dom_sf Gene3D 67 402
IPR011990 TPR-like_helical_dom_sf Gene3D 671 724
IPR011990 TPR-like_helical_dom_sf Gene3D 67 402
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 151 367
IPR043376 NPG1-like PANTHER 9 727
IPR011990 TPR-like_helical_dom_sf Gene3D 420 562
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 152 556
IPR011990 TPR-like_helical_dom_sf Gene3D 563 670
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 529 701
IPR019734 TPR_repeat SMART 582 615
IPR019734 TPR_repeat SMART 149 182
IPR019734 TPR_repeat SMART 527 560
IPR019734 TPR_repeat SMART 686 721
IPR019734 TPR_repeat SMART 334 367
IPR019734 TPR_repeat SMART 616 649
IPR011990 TPR-like_helical_dom_sf Gene3D 671 724

No CAZYmes available for this sequence

No external refs found!