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Description : expansin-like A1
Gene families : OG_01_0000882 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000882_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G551900.1 | |
| Cluster | Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_110 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005576 | extracellular region | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR036908 | RlpA-like_sf | SUPERFAMILY | 20 | 154 |
| IPR007117 | Expansin_CBD | ProSiteProfiles | 170 | 253 |
| IPR007118 | Expan_Lol_pI | PRINTS | 239 | 253 |
| IPR007118 | Expan_Lol_pI | PRINTS | 73 | 91 |
| IPR007118 | Expan_Lol_pI | PRINTS | 51 | 69 |
| IPR007118 | Expan_Lol_pI | PRINTS | 198 | 212 |
| IPR007118 | Expan_Lol_pI | PRINTS | 139 | 155 |
| IPR007117 | Expansin_CBD | Pfam | 160 | 242 |
| IPR007112 | Expansin/allergen_DPBB_dom | ProSiteProfiles | 52 | 156 |
| IPR007112 | Expansin/allergen_DPBB_dom | SMART | 70 | 146 |
| IPR009009 | RlpA-like_DPBB | Pfam | 70 | 146 |
| IPR036749 | Expansin_CBD_sf | SUPERFAMILY | 156 | 252 |
| IPR036908 | RlpA-like_sf | Gene3D | 29 | 152 |
| IPR036749 | Expansin_CBD_sf | Gene3D | 153 | 257 |
| IPR007112 | Expansin/allergen_DPBB_dom | ProSiteProfiles | 52 | 156 |
| IPR036908 | RlpA-like_sf | SUPERFAMILY | 20 | 154 |
| IPR009009 | RlpA-like_DPBB | Pfam | 70 | 146 |
| IPR007117 | Expansin_CBD | ProSiteProfiles | 170 | 253 |
| IPR007118 | Expan_Lol_pI | PRINTS | 239 | 253 |
| IPR007118 | Expan_Lol_pI | PRINTS | 73 | 91 |
| IPR007118 | Expan_Lol_pI | PRINTS | 51 | 69 |
| IPR007118 | Expan_Lol_pI | PRINTS | 198 | 212 |
| IPR007118 | Expan_Lol_pI | PRINTS | 139 | 155 |
| IPR036908 | RlpA-like_sf | Gene3D | 29 | 152 |
| IPR036749 | Expansin_CBD_sf | Gene3D | 153 | 257 |
| IPR007117 | Expansin_CBD | Pfam | 160 | 242 |
| IPR036749 | Expansin_CBD_sf | SUPERFAMILY | 156 | 252 |
| IPR007112 | Expansin/allergen_DPBB_dom | SMART | 70 | 146 |
No CAZYmes available for this sequence
| No external refs found! |