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  5. Seita.9G560700.1

Seita.9G560700.1


Description : phragmoplastin interacting protein 1


Gene families : OG_01_0010768 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010768_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G560700.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_24


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom Pfam 185 252
IPR000504 RRM_dom Pfam 88 152
IPR000504 RRM_dom SMART 83 155
IPR000504 RRM_dom SMART 183 254
IPR035979 RBD_domain_sf SUPERFAMILY 79 158
IPR035979 RBD_domain_sf SUPERFAMILY 173 259
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 164 261
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 3 163
IPR000504 RRM_dom ProSiteProfiles 82 159
IPR000504 RRM_dom ProSiteProfiles 182 258
IPR000504 RRM_dom ProSiteProfiles 182 258
IPR035979 RBD_domain_sf SUPERFAMILY 173 259
IPR000504 RRM_dom SMART 83 155
IPR000504 RRM_dom SMART 183 254
IPR000504 RRM_dom Pfam 88 152
IPR000504 RRM_dom Pfam 185 252
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 164 261
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 3 163
IPR035979 RBD_domain_sf SUPERFAMILY 79 158
IPR034362 PHIP1_RRM2 CDD 183 254
IPR000504 RRM_dom ProSiteProfiles 82 159

No CAZYmes available for this sequence

No external refs found!