Seita.9G562500.1

Description : syntaxin of plants 52

Gene families : OG_01_0055103 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0055103_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G562500.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_201

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005484	SNAP receptor activity	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
MF	GO:0030674	protein-macromolecule adaptor activity	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0060090	molecular adaptor activity	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR045242	Syntaxin	PANTHER	29	237
IPR000727	T_SNARE_dom	ProSiteProfiles	157	219
IPR000727	T_SNARE_dom	Pfam	194	244
IPR006012	Syntaxin/epimorphin_CS	ProSitePatterns	163	202
IPR000727	T_SNARE_dom	SMART	152	219
IPR006012	Syntaxin/epimorphin_CS	ProSitePatterns	163	202
IPR000727	T_SNARE_dom	ProSiteProfiles	157	219
IPR000727	T_SNARE_dom	SMART	152	219
IPR045242	Syntaxin	PANTHER	1	249
IPR000727	T_SNARE_dom	Pfam	194	244

No CAZYmes available for this sequence

External Links

No external refs found!