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  5. Seita.9G564200.1

Seita.9G564200.1


Description : Histone superfamily protein


Gene families : OG_01_0000389 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000389_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G564200.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_182


Type GO Term Name Evidence Source
CC GO:0000786 nucleosome ISM GOs from InterProScan
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0046982 protein heterodimerization activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019809 Histone_H4_CS ProSitePatterns 15 19
IPR035425 CENP-T/H4_C Pfam 39 96
IPR009072 Histone-fold SUPERFAMILY 3 102
IPR001951 Histone_H4 PRINTS 89 100
IPR001951 Histone_H4 PRINTS 5 16
IPR001951 Histone_H4 PRINTS 77 89
IPR001951 Histone_H4 PRINTS 20 39
IPR001951 Histone_H4 PRINTS 40 60
IPR001951 Histone_H4 PRINTS 62 76
IPR009072 Histone-fold Gene3D 2 103
IPR001951 Histone_H4 SMART 16 90
IPR001951 Histone_H4 CDD 18 101
IPR019809 Histone_H4_CS ProSitePatterns 15 19
IPR001951 Histone_H4 SMART 16 90
IPR001951 Histone_H4 CDD 18 101
IPR009072 Histone-fold SUPERFAMILY 3 102
IPR009072 Histone-fold Gene3D 2 103
IPR035425 CENP-T/H4_C Pfam 39 96
IPR001951 Histone_H4 PRINTS 89 100
IPR001951 Histone_H4 PRINTS 5 16
IPR001951 Histone_H4 PRINTS 77 89
IPR001951 Histone_H4 PRINTS 20 39
IPR001951 Histone_H4 PRINTS 40 60
IPR001951 Histone_H4 PRINTS 62 76

No CAZYmes available for this sequence

No external refs found!