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  5. Seita.9G570700.1

Seita.9G570700.1


Description : Transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0001970 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001970_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G570700.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_217


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019775 WD40_repeat_CS ProSitePatterns 133 147
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 402 664
IPR001680 WD40_rpt SMART 557 597
IPR001680 WD40_rpt SMART 1022 1062
IPR001680 WD40_rpt SMART 498 540
IPR001680 WD40_rpt SMART 1169 1213
IPR001680 WD40_rpt SMART 107 146
IPR001680 WD40_rpt SMART 227 266
IPR001680 WD40_rpt SMART 324 364
IPR001680 WD40_rpt SMART 1236 1276
IPR001680 WD40_rpt SMART 285 322
IPR001680 WD40_rpt SMART 763 812
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 273 368
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 736 1111
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 515 1279
IPR001680 WD40_rpt Pfam 290 321
IPR001680 WD40_rpt Pfam 231 265
IPR001680 WD40_rpt Pfam 325 362
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 82 272
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 107 598
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1157 1304
IPR001680 WD40_rpt ProSiteProfiles 234 265
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 736 1111
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 515 1279
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 402 664
IPR019775 WD40_repeat_CS ProSitePatterns 133 147
IPR001680 WD40_rpt Pfam 231 265
IPR001680 WD40_rpt SMART 498 540
IPR001680 WD40_rpt SMART 557 597
IPR001680 WD40_rpt SMART 1022 1062
IPR001680 WD40_rpt SMART 1169 1213
IPR001680 WD40_rpt SMART 107 146
IPR001680 WD40_rpt SMART 227 266
IPR001680 WD40_rpt SMART 324 364
IPR001680 WD40_rpt SMART 1236 1276
IPR001680 WD40_rpt SMART 285 322
IPR001680 WD40_rpt SMART 763 812
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 107 598
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 82 272
IPR001680 WD40_rpt ProSiteProfiles 234 265
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 273 368
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1157 1304

No CAZYmes available for this sequence

No external refs found!