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  5. Sevir.7G090800.1

Sevir.7G090800.1


Description : calnexin 1


Gene families : OG_01_0007100 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007100_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.7G090800.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.7G090800.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_37


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005783 endoplasmic reticulum ISM GOs from InterProScan
BP GO:0006457 protein folding ISM GOs from InterProScan
MF GO:0051082 unfolded protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013320 ConA-like_dom_sf SUPERFAMILY 22 210
IPR018124 Calret/calnex_CS ProSitePatterns 131 139
IPR018124 Calret/calnex_CS ProSitePatterns 273 285
IPR001580 Calret/calnex PRINTS 330 349
IPR001580 Calret/calnex PRINTS 127 143
IPR001580 Calret/calnex PRINTS 273 295
IPR001580 Calret/calnex PRINTS 362 382
IPR001580 Calret/calnex PRINTS 98 116
IPR001580 Calret/calnex PRINTS 225 238
IPR009033 Calreticulin/calnexin_P_dom_sf Gene3D 211 355
IPR009033 Calreticulin/calnexin_P_dom_sf SUPERFAMILY 212 351
IPR001580 Calret/calnex PANTHER 1 533
IPR001580 Calret/calnex Pfam 27 381
IPR018124 Calret/calnex_CS ProSitePatterns 96 111

No CAZYmes available for this sequence

No external refs found!