Sevir.7G143100.1

Description : beta glucosidase 13

Gene families : OG_01_0006293 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006293_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.7G143100.1	No neighbors in network
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.7G143100.1
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_13

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001360	Glyco_hydro_1	PANTHER	2	503
IPR001360	Glyco_hydro_1	Pfam	32	502
IPR033132	Glyco_hydro_1_N_CS	ProSitePatterns	38	52
IPR001360	Glyco_hydro_1	PRINTS	406	414
IPR001360	Glyco_hydro_1	PRINTS	450	467
IPR001360	Glyco_hydro_1	PRINTS	474	486
IPR001360	Glyco_hydro_1	PRINTS	332	346
IPR001360	Glyco_hydro_1	PRINTS	429	440
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	29	502

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH1	429	504	2.7e-179	31	502

External Links

No external refs found!