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  5. Sevir.7G154400.8

Sevir.7G154400.8


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0007868 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007868_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.7G154400.8
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.7G154400.8
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_118
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_125


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 452 486
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 169 203
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 306 340
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 271 305
IPR002885 Pentatricopeptide_rpt TIGRFAM 750 783
IPR002885 Pentatricopeptide_rpt TIGRFAM 524 558
IPR002885 Pentatricopeptide_rpt TIGRFAM 344 375
IPR002885 Pentatricopeptide_rpt TIGRFAM 308 341
IPR002885 Pentatricopeptide_rpt TIGRFAM 715 749
IPR002885 Pentatricopeptide_rpt TIGRFAM 680 714
IPR002885 Pentatricopeptide_rpt TIGRFAM 646 678
IPR002885 Pentatricopeptide_rpt TIGRFAM 610 643
IPR002885 Pentatricopeptide_rpt TIGRFAM 489 523
IPR002885 Pentatricopeptide_rpt TIGRFAM 426 453
IPR002885 Pentatricopeptide_rpt TIGRFAM 207 239
IPR002885 Pentatricopeptide_rpt TIGRFAM 854 880
IPR002885 Pentatricopeptide_rpt TIGRFAM 891 923
IPR002885 Pentatricopeptide_rpt TIGRFAM 559 584
IPR002885 Pentatricopeptide_rpt TIGRFAM 455 488
IPR002885 Pentatricopeptide_rpt TIGRFAM 785 811
IPR002885 Pentatricopeptide_rpt TIGRFAM 274 307
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 655 916
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 748 782
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 522 556
IPR011990 TPR-like_helical_dom_sf Gene3D 740 814
IPR011990 TPR-like_helical_dom_sf Gene3D 590 672
IPR011990 TPR-like_helical_dom_sf Gene3D 516 586
IPR011990 TPR-like_helical_dom_sf Gene3D 673 739
IPR002885 Pentatricopeptide_rpt Pfam 605 635
IPR002885 Pentatricopeptide_rpt Pfam 337 368
IPR002885 Pentatricopeptide_rpt Pfam 778 811
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 713 747
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 889 923
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 608 642
IPR002885 Pentatricopeptide_rpt Pfam 207 236
IPR002885 Pentatricopeptide_rpt Pfam 854 880
IPR002885 Pentatricopeptide_rpt Pfam 426 449
IPR002885 Pentatricopeptide_rpt Pfam 455 500
IPR002885 Pentatricopeptide_rpt Pfam 521 570
IPR002885 Pentatricopeptide_rpt Pfam 891 937
IPR002885 Pentatricopeptide_rpt Pfam 712 760
IPR002885 Pentatricopeptide_rpt Pfam 642 690
IPR002885 Pentatricopeptide_rpt Pfam 271 318
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 341 375
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 783 817
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 557 591
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 417 451
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 851 885
IPR011990 TPR-like_helical_dom_sf Gene3D 393 515
IPR011990 TPR-like_helical_dom_sf Gene3D 264 392
IPR011990 TPR-like_helical_dom_sf Gene3D 820 964
IPR011990 TPR-like_helical_dom_sf Gene3D 114 263
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 678 712
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 643 677
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 487 521
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 204 238

No CAZYmes available for this sequence

No external refs found!