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  5. Sevir.7G157700.1

Sevir.7G157700.1


Description : EF hand calcium-binding protein family


Gene families : OG_01_0012063 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012063_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.7G157700.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.7G157700.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_100
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_13


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom ProSiteProfiles 193 228
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 150 162
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 206 218
IPR002048 EF_hand_dom ProSiteProfiles 231 266
IPR002048 EF_hand_dom SMART 105 133
IPR002048 EF_hand_dom SMART 197 225
IPR002048 EF_hand_dom SMART 141 169
IPR002048 EF_hand_dom SMART 235 263
IPR002048 EF_hand_dom CDD 199 261
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 114 126
IPR002048 EF_hand_dom ProSiteProfiles 137 172
IPR011992 EF-hand-dom_pair SUPERFAMILY 104 261
IPR002048 EF_hand_dom ProSiteProfiles 101 136
IPR002048 EF_hand_dom Pfam 105 167
IPR002048 EF_hand_dom Pfam 196 261
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 244 256
IPR002048 EF_hand_dom CDD 105 162

No CAZYmes available for this sequence

No external refs found!