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  5. Sevir.7G187600.1

Sevir.7G187600.1


Description : Glycosyl hydrolase family protein


Gene families : OG_01_0000165 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000165_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.7G187600.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.7G187600.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_268
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_15


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0009044 xylan 1,4-beta-xylosidase activity ISM GOs from InterProScan
BP GO:0045493 xylan catabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001764 Glyco_hydro_3_N PRINTS 111 130
IPR001764 Glyco_hydro_3_N PRINTS 273 291
IPR001764 Glyco_hydro_3_N PRINTS 200 216
IPR026891 Fn3-like SMART 688 758
IPR026891 Fn3-like Pfam 689 756
IPR036881 Glyco_hydro_3_C_sf Gene3D 374 620
IPR044993 BXL PANTHER 26 764
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 37 388
IPR001764 Glyco_hydro_3_N Pfam 105 346
IPR013783 Ig-like_fold Gene3D 658 764
IPR036962 Glyco_hydro_3_N_sf Gene3D 49 367
IPR036881 Glyco_hydro_3_C_sf SUPERFAMILY 390 622
IPR002772 Glyco_hydro_3_C Pfam 390 619
HMM Family HMM Length Query Length e-Value Query Start Query End
GH3 216 766 8.9e-65 71 320
No external refs found!