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  5. Sevir.7G196000.2

Sevir.7G196000.2


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0002922 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002922_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.7G196000.2
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.7G196000.2 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_205


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035979 RBD_domain_sf SUPERFAMILY 193 277
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 279 362
IPR000504 RRM_dom Pfam 378 442
IPR000504 RRM_dom Pfam 281 346
IPR000504 RRM_dom Pfam 201 269
IPR035979 RBD_domain_sf SUPERFAMILY 278 443
IPR000504 RRM_dom ProSiteProfiles 376 458
IPR000504 RRM_dom ProSiteProfiles 199 277
IPR000504 RRM_dom SMART 200 273
IPR000504 RRM_dom SMART 377 452
IPR000504 RRM_dom SMART 280 359
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 118 278
IPR000504 RRM_dom ProSiteProfiles 279 363
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 365 486

No CAZYmes available for this sequence

No external refs found!