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  5. Sevir.7G197000.1

Sevir.7G197000.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0014415 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014415_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.7G197000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.7G197000.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_55
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_130


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 178 212
IPR011990 TPR-like_helical_dom_sf Gene3D 315 505
IPR002885 Pentatricopeptide_rpt TIGRFAM 181 213
IPR002885 Pentatricopeptide_rpt TIGRFAM 217 248
IPR002885 Pentatricopeptide_rpt TIGRFAM 250 278
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 111 454
IPR019734 TPR_repeat Pfam 287 311
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 248 282
IPR002885 Pentatricopeptide_rpt Pfam 217 260
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 389 423
IPR002885 Pentatricopeptide_rpt Pfam 181 210
IPR002885 Pentatricopeptide_rpt Pfam 392 420
IPR011990 TPR-like_helical_dom_sf Gene3D 98 242
IPR011990 TPR-like_helical_dom_sf Gene3D 243 314
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 213 247

No CAZYmes available for this sequence

No external refs found!