Sevir.7G218100.1

Description : copper chaperone for SOD1

Gene families : OG_01_0015502 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015502_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.7G218100.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.7G218100.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_97
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_63

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006801	superoxide metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan
BP	GO:0072593	reactive oxygen species metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR024134	SOD_Cu/Zn_/chaperone	PANTHER	14	309
IPR006121	HMA_dom	Pfam	91	146
IPR006121	HMA_dom	CDD	90	149
IPR036163	HMA_dom_sf	SUPERFAMILY	88	151
IPR001424	SOD_Cu_Zn_dom	Pfam	175	275
IPR006121	HMA_dom	ProSiteProfiles	95	150
IPR036423	SOD-like_Cu/Zn_dom_sf	SUPERFAMILY	153	307
IPR036423	SOD-like_Cu/Zn_dom_sf	Gene3D	160	286

No CAZYmes available for this sequence

External Links

No external refs found!