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  5. Sevir.7G238600.3

Sevir.7G238600.3


Description : villin 4


Gene families : OG_01_0000277 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000277_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.7G238600.3 No neighbors in network
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.7G238600.3
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_33


Type GO Term Name Evidence Source
MF GO:0003779 actin binding ISM GOs from InterProScan
BP GO:0007010 cytoskeleton organization ISM GOs from InterProScan
MF GO:0051015 actin filament binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007123 Gelsolin-like_dom Pfam 455 528
IPR007123 Gelsolin-like_dom Pfam 683 758
IPR007123 Gelsolin-like_dom Pfam 317 382
IPR007123 Gelsolin-like_dom Pfam 74 155
IPR007123 Gelsolin-like_dom Pfam 195 262
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 567 658
IPR036180 Gelsolin-like_dom_sf SUPERFAMILY 298 473
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 433 566
IPR003128 Villin_headpiece ProSiteProfiles 926 991
IPR007122 Villin/Gelsolin SMART 438 535
IPR007122 Villin/Gelsolin SMART 565 652
IPR007122 Villin/Gelsolin SMART 182 279
IPR007122 Villin/Gelsolin SMART 669 764
IPR007122 Villin/Gelsolin SMART 297 389
IPR007122 Villin/Gelsolin SMART 63 161
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 50 175
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 295 399
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 659 779
IPR036886 Villin_headpiece_dom_sf Gene3D 915 991
IPR007122 Villin/Gelsolin PANTHER 45 991
IPR003128 Villin_headpiece Pfam 956 991
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 176 294
IPR003128 Villin_headpiece SMART 956 991
IPR036886 Villin_headpiece_dom_sf SUPERFAMILY 917 991
IPR007122 Villin/Gelsolin PRINTS 578 598
IPR007122 Villin/Gelsolin PRINTS 690 712
IPR007122 Villin/Gelsolin PRINTS 368 389
IPR007122 Villin/Gelsolin PRINTS 482 500
IPR007122 Villin/Gelsolin PRINTS 515 535
IPR007122 Villin/Gelsolin PRINTS 457 473
IPR007122 Villin/Gelsolin PRINTS 638 657
IPR007122 Villin/Gelsolin PRINTS 719 738

No CAZYmes available for this sequence

No external refs found!