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  5. Sevir.7G272800.1

Sevir.7G272800.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0001699 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001699_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.7G272800.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.7G272800.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_109
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_103


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006996 organelle organization ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR025697 CLU_dom ProSiteProfiles 316 604
IPR028275 CLU_N Pfam 51 122
IPR019734 TPR_repeat SMART 1024 1057
IPR019734 TPR_repeat SMART 982 1015
IPR019734 TPR_repeat SMART 940 973
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 977 1101
IPR033646 CLU-central CDD 728 870
IPR027523 CLU_prot PANTHER 1 1720
IPR033646 CLU-central Pfam 726 869
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 907 1011
IPR019734 TPR_repeat ProSiteProfiles 940 973
IPR023231 GSKIP_dom_sf SUPERFAMILY 218 276
IPR011990 TPR-like_helical_dom_sf Gene3D 899 1144

No CAZYmes available for this sequence

No external refs found!