Sevir.7G282100.1

Description : Ca2+-activated RelA/spot homolog

Gene families : OG_01_0008617 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008617_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.7G282100.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.7G282100.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_182
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_84

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015969	guanosine tetraphosphate metabolic process	ISM	GOs from InterProScan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002048	EF_hand_dom	CDD	469	520
IPR002048	EF_hand_dom	Pfam	469	523
IPR007685	RelA_SpoT	CDD	291	414
IPR043519	NT_sf	SUPERFAMILY	255	448
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	508	520
IPR007685	RelA_SpoT	Pfam	304	426
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	474	486
IPR002048	EF_hand_dom	ProSiteProfiles	498	530
IPR043519	NT_sf	Gene3D	255	408
IPR011992	EF-hand-dom_pair	SUPERFAMILY	469	527
IPR007685	RelA_SpoT	SMART	304	428
IPR002048	EF_hand_dom	SMART	465	493
IPR002048	EF_hand_dom	SMART	499	527
IPR002048	EF_hand_dom	ProSiteProfiles	469	496
IPR006674	HD_domain	ProSiteProfiles	107	207

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.7G282100.1

Expression Profile

Co-expression Networks

Functional Annotation