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Description : Transducin/WD40 repeat-like superfamily protein
Gene families : OG_01_0002693 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002693_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.7G304900.1 | |
| Neighborhood | Setaria viridis coexpression network - Anderson et al (2021): Sevir.7G304900.1 | |
| Cluster | Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_92 | |
| Cluster | Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_20 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR001680 | WD40_rpt | Pfam | 115 | 154 |
| IPR001680 | WD40_rpt | Pfam | 210 | 241 |
| IPR001680 | WD40_rpt | Pfam | 34 | 67 |
| IPR001680 | WD40_rpt | Pfam | 248 | 283 |
| IPR001680 | WD40_rpt | Pfam | 288 | 323 |
| IPR001680 | WD40_rpt | SMART | 19 | 68 |
| IPR001680 | WD40_rpt | SMART | 244 | 283 |
| IPR001680 | WD40_rpt | SMART | 286 | 325 |
| IPR001680 | WD40_rpt | SMART | 202 | 241 |
| IPR001680 | WD40_rpt | SMART | 73 | 110 |
| IPR001680 | WD40_rpt | SMART | 114 | 154 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 49 | 77 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 209 | 250 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 206 | 474 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 33 | 445 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 270 | 284 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 55 | 69 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 97 | 111 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 251 | 292 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 270 | 284 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 121 | 156 |
| IPR021772 | WDR48/Bun107 | Pfam | 602 | 749 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 25 | 205 |
No CAZYmes available for this sequence
| No external refs found! |