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  5. Sevir.7G321600.1

Sevir.7G321600.1


Description : Transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0002286 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002286_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.7G321600.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.7G321600.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt SMART 259 301
IPR001680 WD40_rpt SMART 149 191
IPR001680 WD40_rpt SMART 305 345
IPR001680 WD40_rpt SMART 351 391
IPR001680 WD40_rpt SMART 215 255
IPR022052 Histone-bd_RBBP4_N Pfam 48 114
IPR001680 WD40_rpt ProSiteProfiles 358 400
IPR001680 WD40_rpt ProSiteProfiles 268 310
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 50 464
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 144 452
IPR001680 WD40_rpt Pfam 268 301
IPR001680 WD40_rpt Pfam 354 391

No CAZYmes available for this sequence

No external refs found!