Sevir.8G004050.1

Description : Rab escort protein

Gene families : OG_01_0002117 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002117_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G004050.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G004050.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_98
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_63

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005092	GDP-dissociation inhibitor activity	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005968	Rab-protein geranylgeranyltransferase complex	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007264	small GTPase mediated signal transduction	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0018342	protein prenylation	None	Extended
BP	GO:0018344	protein geranylgeranylation	ISM	GOs from InterProScan
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0097354	prenylation	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR018203	GDP_dissociation_inhibitor	PRINTS	297	318
IPR018203	GDP_dissociation_inhibitor	PRINTS	22	40
IPR018203	GDP_dissociation_inhibitor	PRINTS	40	57
IPR018203	GDP_dissociation_inhibitor	PRINTS	134	150
IPR018203	GDP_dissociation_inhibitor	PRINTS	279	296
IPR018203	GDP_dissociation_inhibitor	Pfam	112	453
IPR018203	GDP_dissociation_inhibitor	Pfam	18	74
IPR036188	FAD/NAD-bd_sf	Gene3D	20	534
IPR001738	Rab_escort	PIRSF	85	552
IPR001738	Rab_escort	PIRSF	13	108
IPR018203	GDP_dissociation_inhibitor	PANTHER	19	539
IPR036188	FAD/NAD-bd_sf	SUPERFAMILY	17	356

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.8G004050.1

Expression Profile

Co-expression Networks

Functional Annotation