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  5. Sevir.8G005200.1

Sevir.8G005200.1


Description : tonoplast monosaccharide transporter2


Gene families : OG_01_0012171 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012171_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G005200.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G005200.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_58
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_33


Type GO Term Name Evidence Source
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0022857 transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005828 MFS_sugar_transport-like Pfam 7 223
IPR005828 MFS_sugar_transport-like Pfam 477 697
IPR036259 MFS_trans_sf Gene3D 3 238
IPR020846 MFS_dom ProSiteProfiles 7 689
IPR036259 MFS_trans_sf SUPERFAMILY 6 694
IPR036259 MFS_trans_sf Gene3D 455 702
IPR003663 Sugar/inositol_transpt PRINTS 100 119
IPR003663 Sugar/inositol_transpt PRINTS 15 25
IPR003663 Sugar/inositol_transpt PRINTS 502 512
IPR003663 Sugar/inositol_transpt PRINTS 601 622
IPR003663 Sugar/inositol_transpt PRINTS 624 636
IPR005829 Sugar_transporter_CS ProSitePatterns 63 80
IPR005829 Sugar_transporter_CS ProSitePatterns 105 130

No CAZYmes available for this sequence

No external refs found!