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  5. Sevir.8G026400.1

Sevir.8G026400.1


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0004683 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004683_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G026400.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G026400.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_119


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 215 227
IPR044590 CML48/49/50 PANTHER 57 307
IPR011992 EF-hand-dom_pair SUPERFAMILY 136 302
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 149 161
IPR002048 EF_hand_dom Pfam 207 235
IPR002048 EF_hand_dom ProSiteProfiles 136 171
IPR002048 EF_hand_dom ProSiteProfiles 202 237
IPR002048 EF_hand_dom SMART 140 168
IPR002048 EF_hand_dom SMART 206 234
IPR044590 CML48/49/50 PANTHER 17 55
IPR002048 EF_hand_dom Pfam 142 163

No CAZYmes available for this sequence

No external refs found!