1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.8G045700.1

Sevir.8G045700.1


Description : syntaxin of plants 61


Gene families : OG_01_0007384 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007384_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G045700.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G045700.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_135
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_463


Type GO Term Name Evidence Source
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0016192 vesicle-mediated transport ISM GOs from InterProScan
BP GO:0048193 Golgi vesicle transport ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR010989 SNARE SUPERFAMILY 5 102
IPR000727 T_SNARE_dom Pfam 187 231
IPR015260 Syntaxin-6_N Pfam 6 96
IPR000727 T_SNARE_dom ProSiteProfiles 143 205
IPR000727 T_SNARE_dom SMART 138 205
IPR045242 Syntaxin PANTHER 1 234

No CAZYmes available for this sequence

No external refs found!