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Description : LEUNIG_homolog
Gene families : OG_01_0001313 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001313_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G001900.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G001900.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_204 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_186 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003714 | transcription corepressor activity | ISM | GOs from InterProScan |
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR001680 | WD40_rpt | ProSiteProfiles | 483 | 524 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 654 | 694 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 568 | 610 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 611 | 768 |
| IPR006594 | LisH | ProSiteProfiles | 8 | 40 |
| IPR001680 | WD40_rpt | Pfam | 565 | 600 |
| IPR001680 | WD40_rpt | Pfam | 736 | 768 |
| IPR001680 | WD40_rpt | Pfam | 488 | 515 |
| IPR001680 | WD40_rpt | Pfam | 654 | 685 |
| IPR001680 | WD40_rpt | Pfam | 526 | 557 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 525 | 557 |
| IPR006594 | LisH | Pfam | 10 | 34 |
| IPR006594 | LisH | SMART | 8 | 40 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 441 | 610 |
| IPR044716 | LEUNIG-like | PANTHER | 353 | 768 |
| IPR044716 | LEUNIG-like | PANTHER | 2 | 351 |
| IPR001680 | WD40_rpt | SMART | 729 | 768 |
| IPR001680 | WD40_rpt | SMART | 476 | 515 |
| IPR001680 | WD40_rpt | SMART | 561 | 601 |
| IPR001680 | WD40_rpt | SMART | 647 | 685 |
| IPR001680 | WD40_rpt | SMART | 604 | 643 |
| IPR001680 | WD40_rpt | SMART | 688 | 727 |
| IPR001680 | WD40_rpt | SMART | 518 | 557 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 736 | 768 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 485 | 768 |
No CAZYmes available for this sequence
| No external refs found! |