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  5. Sobic.001G003300.1

Sobic.001G003300.1


Description : ABC-2 type transporter family protein


Gene families : OG_01_0011546 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011546_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G003300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G003300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_151
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_143


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 104 343
IPR003593 AAA+_ATPase SMART 130 320
IPR013525 ABC2_TM Pfam 430 640
IPR003439 ABC_transporter-like_ATP-bd Pfam 131 270
IPR027417 P-loop_NTPase SUPERFAMILY 120 337
IPR027417 P-loop_NTPase Gene3D 93 338

No CAZYmes available for this sequence

No external refs found!