Sobic.001G026000.1

Description : Mevalonate/galactokinase family protein

Gene families : OG_01_0001248 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001248_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G026000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G026000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_223
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_7

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004335	galactokinase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006012	galactose metabolic process	ISM	GOs from InterProScan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	ISM	GOs from InterProScan
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019200	carbohydrate kinase activity	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046835	carbohydrate phosphorylation	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR019539	GalKase_N	Pfam	45	93
IPR000705	Galactokinase	TIGRFAM	44	471
IPR000705	Galactokinase	PRINTS	369	383
IPR000705	Galactokinase	PRINTS	62	80
IPR000705	Galactokinase	PRINTS	155	173
IPR006204	GHMP_kinase_N_dom	Pfam	157	222
IPR006203	GHMP_knse_ATP-bd_CS	ProSitePatterns	164	175
IPR013750	GHMP_kinase_C_dom	Pfam	398	470
IPR019741	Galactokinase_CS	ProSitePatterns	62	73
IPR036554	GHMP_kinase_C_sf	SUPERFAMILY	260	478
IPR014721	Ribsml_uS5_D2-typ_fold_subgr	Gene3D	45	241
IPR006206	Mevalonate/galactokinase	PIRSF	30	502
IPR020568	Ribosomal_Su5_D2-typ_SF	SUPERFAMILY	37	245

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.001G026000.1

Expression Profile

Co-expression Networks

Functional Annotation