Sobic.001G050100.1

Description : germin-like protein 4

Gene families : OG_01_0014605 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014605_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G050100.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G050100.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_308
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_15

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0030145	manganese ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR014710	RmlC-like_jellyroll	Gene3D	29	233
IPR001929	Germin	PRINTS	154	174
IPR001929	Germin	PRINTS	187	202
IPR001929	Germin	PRINTS	124	144
IPR011051	RmlC_Cupin_sf	SUPERFAMILY	30	230
IPR019780	Germin_Mn-BS	ProSitePatterns	119	132
IPR006045	Cupin_1	Pfam	81	223
IPR006045	Cupin_1	SMART	74	224

No CAZYmes available for this sequence

External Links

No external refs found!