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  5. Sobic.001G050900.1

Sobic.001G050900.1


Description : Oxoglutarate/iron-dependent oxygenase


Gene families : OG_01_0018272 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0018272_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G050900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G050900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_58
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_99


Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding ISM GOs from InterProScan
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen ISM GOs from InterProScan
MF GO:0031418 L-ascorbic acid binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase ProSiteProfiles 118 240
IPR003582 ShKT_dom ProSiteProfiles 255 295
IPR003582 ShKT_dom Pfam 254 295
IPR006620 Pro_4_hyd_alph SMART 42 239
IPR003582 ShKT_dom SMART 254 296
IPR044862 Pro_4_hyd_alph_FE2OG_OXY Pfam 122 239
IPR045054 P4HA-like PANTHER 3 297

No CAZYmes available for this sequence

No external refs found!