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  5. Sobic.001G062500.1

Sobic.001G062500.1


Description : aldehyde oxidase 2


Gene families : OG_01_0001595 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001595_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G062500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G062500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_266
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_68


Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
MF GO:0050660 flavin adenine dinucleotide binding ISM GOs from InterProScan
MF GO:0051536 iron-sulfur cluster binding ISM GOs from InterProScan
MF GO:0051537 2 iron, 2 sulfur cluster binding ISM GOs from InterProScan
MF GO:0071949 FAD binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016169 FAD-bd_PCMH_sub2 Gene3D 301 419
IPR002888 2Fe-2S-bd Pfam 97 183
IPR008274 AldOxase/xan_DH_MoCoBD1 Pfam 748 1268
IPR012675 Beta-grasp_dom_sf Gene3D 11 102
IPR005107 CO_DH_flav_C SMART 428 536
IPR036856 Ald_Oxase/Xan_DH_a/b_sf SUPERFAMILY 585 721
IPR037165 AldOxase/xan_DH_Mopterin-bd_sf SUPERFAMILY 722 1346
IPR036683 CO_DH_flav_C_dom_sf SUPERFAMILY 426 541
IPR002346 Mopterin_DH_FAD-bd Pfam 250 420
IPR005107 CO_DH_flav_C Pfam 429 535
IPR016208 Ald_Oxase/xanthine_DH-like PANTHER 13 1366
IPR016166 FAD-bd_PCMH ProSiteProfiles 244 422
IPR036884 2Fe-2S-bd_dom_sf SUPERFAMILY 104 207
IPR001041 2Fe-2S_ferredoxin-type ProSiteProfiles 14 101
IPR001041 2Fe-2S_ferredoxin-type Pfam 20 86
IPR000674 Ald_Oxase/Xan_DH_a/b SMART 608 719
IPR000674 Ald_Oxase/Xan_DH_a/b Pfam 608 718
IPR036318 FAD-bd_PCMH-like_sf SUPERFAMILY 213 419
IPR036010 2Fe-2S_ferredoxin-like_sf SUPERFAMILY 15 101
IPR016208 Ald_Oxase/xanthine_DH-like PIRSF 9 1366
IPR006058 2Fe2S_fd_BS ProSitePatterns 53 61

No CAZYmes available for this sequence

No external refs found!