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  5. Sobic.001G078300.1

Sobic.001G078300.1


Description : hydroxyproline-rich glycoprotein family protein


Gene families : OG_01_0011909 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011909_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G078300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G078300.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32


Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore ISM GOs from InterProScan
BP GO:0006913 nucleocytoplasmic transport ISM GOs from InterProScan
MF GO:0008139 nuclear localization sequence binding ISM GOs from InterProScan
MF GO:0017056 structural constituent of nuclear pore ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR024882 NUP58/p45/49 PANTHER 186 674
IPR024882 NUP58/p45/49 PANTHER 126 180
IPR024882 NUP58/p45/49 PANTHER 10 122

No CAZYmes available for this sequence

No external refs found!