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  5. Sobic.001G083300.5

Sobic.001G083300.5


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0015929 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015929_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G083300.5
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G083300.5
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_13
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_134


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019775 WD40_repeat_CS ProSitePatterns 108 122
IPR001680 WD40_rpt SMART 262 299
IPR001680 WD40_rpt SMART 82 121
IPR001680 WD40_rpt SMART 211 259
IPR001680 WD40_rpt SMART 1 40
IPR001680 WD40_rpt SMART 42 80
IPR001680 WD40_rpt ProSiteProfiles 89 130
IPR001680 WD40_rpt Pfam 92 121
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 15 293
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 8 320

No CAZYmes available for this sequence

No external refs found!