Sobic.001G088100.2

Description : homolog of yeast ADA2 2B

Gene families : OG_01_0015159 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015159_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G088100.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G088100.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_150
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_166

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003712	transcription coregulator activity	None	Extended
MF	GO:0003713	transcription coactivator activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031056	regulation of histone modification	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0035065	regulation of histone acetylation	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901873	regulation of post-translational protein modification	None	Extended
BP	GO:1901983	regulation of protein acetylation	None	Extended
BP	GO:2000756	regulation of peptidyl-lysine acetylation	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR041983	ADA2-like_ZZ	CDD	52	100
IPR017930	Myb_dom	Pfam	111	152
IPR009057	Homeobox-like_sf	SUPERFAMILY	105	158
IPR000433	Znf_ZZ	ProSitePatterns	54	81
IPR001005	SANT/Myb	ProSiteProfiles	112	155
IPR017884	SANT_dom	ProSiteProfiles	107	159
IPR009057	Homeobox-like_sf	SUPERFAMILY	469	554
IPR000433	Znf_ZZ	Pfam	50	91
IPR000433	Znf_ZZ	ProSiteProfiles	52	95
IPR000433	Znf_ZZ	SMART	48	93
IPR016827	Ada2/TADA2	PIRSF	39	561
IPR001005	SANT/Myb	CDD	112	153
IPR007526	SWIRM	ProSiteProfiles	474	565
IPR001005	SANT/Myb	SMART	108	157
IPR017930	Myb_dom	ProSiteProfiles	112	159
IPR036388	WH-like_DNA-bd_sf	Gene3D	483	554
IPR043145	Znf_ZZ_sf	Gene3D	45	100

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.001G088100.2

Expression Profile

Co-expression Networks

Functional Annotation