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  5. Sevir.8G056300.1

Sevir.8G056300.1


Description : disease resistance family protein / LRR family protein


Gene families : OG_01_0012400 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012400_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G056300.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G056300.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_35
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_75


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR032675 LRR_dom_sf Gene3D 40 206
IPR001611 Leu-rich_rpt Pfam 814 835
IPR001611 Leu-rich_rpt Pfam 790 809
IPR032675 LRR_dom_sf Gene3D 735 888
IPR032675 LRR_dom_sf Gene3D 410 718
IPR001611 Leu-rich_rpt Pfam 111 125
IPR032675 LRR_dom_sf Gene3D 207 335
IPR032675 LRR_dom_sf Gene3D 336 409
IPR001611 Leu-rich_rpt Pfam 214 272
IPR003591 Leu-rich_rpt_typical-subtyp SMART 412 436
IPR003591 Leu-rich_rpt_typical-subtyp SMART 237 261
IPR003591 Leu-rich_rpt_typical-subtyp SMART 110 135
IPR003591 Leu-rich_rpt_typical-subtyp SMART 811 835
IPR003591 Leu-rich_rpt_typical-subtyp SMART 363 387
IPR003591 Leu-rich_rpt_typical-subtyp SMART 787 810
IPR013210 LRR_N_plant-typ Pfam 41 77

No CAZYmes available for this sequence

No external refs found!