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Description : Beige/BEACH domain ;WD domain, G-beta repeat protein
Gene families : OG_01_0005908 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005908_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G093800.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G093800.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_138 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_68 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR036372 | BEACH_dom_sf | Gene3D | 2958 | 3248 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 3378 | 3413 |
| IPR000409 | BEACH_dom | CDD | 2969 | 3248 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 3397 | 3411 |
| IPR011993 | PH-like_dom_sf | Gene3D | 2769 | 2930 |
| IPR016024 | ARM-type_fold | SUPERFAMILY | 196 | 574 |
| IPR036372 | BEACH_dom_sf | SUPERFAMILY | 2963 | 3248 |
| IPR023362 | PH-BEACH_dom | ProSiteProfiles | 2765 | 2931 |
| IPR013320 | ConA-like_dom_sf | SUPERFAMILY | 1084 | 1276 |
| IPR001680 | WD40_rpt | Pfam | 3378 | 3410 |
| IPR001680 | WD40_rpt | Pfam | 3332 | 3361 |
| IPR000409 | BEACH_dom | Pfam | 2969 | 3248 |
| IPR000409 | BEACH_dom | ProSiteProfiles | 2956 | 3248 |
| IPR023362 | PH-BEACH_dom | Pfam | 2881 | 2930 |
| IPR023362 | PH-BEACH_dom | CDD | 2768 | 2933 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 3259 | 3449 |
| IPR016024 | ARM-type_fold | SUPERFAMILY | 587 | 1019 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 3539 | 3580 |
| IPR000409 | BEACH_dom | SMART | 2968 | 3248 |
| IPR001680 | WD40_rpt | SMART | 3371 | 3410 |
| IPR001680 | WD40_rpt | SMART | 3466 | 3500 |
| IPR001680 | WD40_rpt | SMART | 3532 | 3571 |
| IPR001680 | WD40_rpt | SMART | 3318 | 3362 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 3301 | 3575 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 3450 | 3579 |
| IPR011989 | ARM-like | Gene3D | 490 | 899 |
No CAZYmes available for this sequence
| No external refs found! |