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  5. Sobic.001G094400.1

Sobic.001G094400.1


Description : calmodulin 1


Gene families : OG_01_0016327 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016327_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G094400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G094400.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_69


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom Pfam 83 146
IPR002048 EF_hand_dom Pfam 12 71
IPR002048 EF_hand_dom ProSiteProfiles 7 42
IPR002048 EF_hand_dom ProSiteProfiles 116 151
IPR002048 EF_hand_dom CDD 84 146
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 56 68
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 93 105
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 20 32
IPR002048 EF_hand_dom ProSiteProfiles 43 78
IPR002048 EF_hand_dom ProSiteProfiles 80 115
IPR011992 EF-hand-dom_pair SUPERFAMILY 2 147
IPR002048 EF_hand_dom SMART 47 75
IPR002048 EF_hand_dom SMART 120 148
IPR002048 EF_hand_dom SMART 11 39
IPR002048 EF_hand_dom SMART 84 112
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 129 141
IPR002048 EF_hand_dom CDD 12 73

No CAZYmes available for this sequence

No external refs found!