Sobic.001G113500.1

Description : RING/FYVE/PHD zinc finger superfamily protein

Gene families : OG_01_0009876 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009876_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G113500.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G113500.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_221
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_227

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011016	Znf_RING-CH	SMART	57	109
IPR011016	Znf_RING-CH	ProSiteProfiles	50	115
IPR013083	Znf_RING/FYVE/PHD	Gene3D	44	122
IPR011016	Znf_RING-CH	Pfam	58	108

No CAZYmes available for this sequence

External Links

No external refs found!