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Description : PLAT/LH2 domain-containing lipoxygenase family protein
Gene families : OG_01_0000612 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000612_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G125800.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G125800.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_216 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_127 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR001246 | LipOase_plant | PRINTS | 304 | 325 |
| IPR001246 | LipOase_plant | PRINTS | 163 | 184 |
| IPR001246 | LipOase_plant | PRINTS | 137 | 155 |
| IPR001246 | LipOase_plant | PRINTS | 468 | 492 |
| IPR001246 | LipOase_plant | PRINTS | 235 | 254 |
| IPR001246 | LipOase_plant | PRINTS | 793 | 807 |
| IPR001246 | LipOase_plant | PRINTS | 203 | 219 |
| IPR001246 | LipOase_plant | PRINTS | 354 | 370 |
| IPR042057 | Lipoxy_PLAT/LH2 | CDD | 22 | 168 |
| IPR000907 | LipOase | PANTHER | 1 | 888 |
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 276 | 366 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 172 | 888 |
| IPR013819 | LipOase_C | ProSiteProfiles | 170 | 888 |
| IPR001024 | PLAT/LH2_dom | ProSiteProfiles | 38 | 167 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 22 | 171 |
| IPR013819 | LipOase_C | Pfam | 180 | 864 |
| IPR020833 | LipOase_Fe_BS | ProSitePatterns | 533 | 547 |
| IPR013819 | LipOase_C | PRINTS | 533 | 550 |
| IPR013819 | LipOase_C | PRINTS | 515 | 532 |
| IPR013819 | LipOase_C | PRINTS | 553 | 573 |
| IPR001024 | PLAT/LH2_dom | Pfam | 64 | 166 |
| IPR020834 | LipOase_CS | ProSitePatterns | 560 | 570 |
| IPR001024 | PLAT/LH2_dom | SMART | 21 | 168 |
No CAZYmes available for this sequence
| No external refs found! |