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Description : PLAT/LH2 domain-containing lipoxygenase family protein
Gene families : OG_01_0000612 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000612_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G125900.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G125900.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_216 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_127 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR042057 | Lipoxy_PLAT/LH2 | CDD | 18 | 161 |
| IPR001024 | PLAT/LH2_dom | ProSiteProfiles | 34 | 160 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 17 | 164 |
| IPR020834 | LipOase_CS | ProSitePatterns | 543 | 553 |
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 268 | 358 |
| IPR013819 | LipOase_C | Pfam | 173 | 843 |
| IPR000907 | LipOase | PANTHER | 6 | 866 |
| IPR001024 | PLAT/LH2_dom | SMART | 17 | 161 |
| IPR013819 | LipOase_C | PRINTS | 516 | 533 |
| IPR013819 | LipOase_C | PRINTS | 536 | 556 |
| IPR013819 | LipOase_C | PRINTS | 498 | 515 |
| IPR013819 | LipOase_C | ProSiteProfiles | 163 | 866 |
| IPR001246 | LipOase_plant | PRINTS | 296 | 317 |
| IPR001246 | LipOase_plant | PRINTS | 773 | 787 |
| IPR001246 | LipOase_plant | PRINTS | 130 | 148 |
| IPR001246 | LipOase_plant | PRINTS | 196 | 212 |
| IPR001246 | LipOase_plant | PRINTS | 345 | 361 |
| IPR001246 | LipOase_plant | PRINTS | 156 | 177 |
| IPR001246 | LipOase_plant | PRINTS | 227 | 246 |
| IPR001246 | LipOase_plant | PRINTS | 384 | 403 |
| IPR001246 | LipOase_plant | PRINTS | 451 | 475 |
| IPR001024 | PLAT/LH2_dom | Pfam | 59 | 159 |
| IPR020833 | LipOase_Fe_BS | ProSitePatterns | 516 | 530 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 165 | 866 |
No CAZYmes available for this sequence
| No external refs found! |