Sobic.001G128800.1

Description : CCCH-type zinc fingerfamily protein with RNA-binding domain

Gene families : OG_01_0000359 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000359_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G128800.1	No neighbors in network
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G128800.1
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_124

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036855	Znf_CCCH_sf	SUPERFAMILY	239	261
IPR000571	Znf_CCCH	Pfam	241	261
IPR000571	Znf_CCCH	ProSiteProfiles	236	263
IPR000571	Znf_CCCH	SMART	238	262

No CAZYmes available for this sequence

External Links

No external refs found!